Contrasting development of soil microbial community structure under no-tilled perennial and tilled cropping during early pedogenesis of a Mollisol

A range of agricultural practices influence soil microbial communities, such as tillage and organic C inputs, however such effects are largely unknown at the initial stage of soil formation. Using an eight-year field experiment established on exposed parent material (PM) of a Mollisol, our objectives were to: (1) to determine the effects of field management and soil depth on soil microbial community structure; (2) to elucidate shifts in microbial community structure in relation to PM, compared to an arable Mollisol (MO) without organic amendment; and (3) to identify the controlling factors of such changes in microbial community structure. The treatments included two no-tilled soils supporting perennial crops, and four tilled soils under the same cropping system, with or without chemical fertilization and crop residue amendment. Principal component (PC) analysis of phospholipid fatty acid (PLFA) profiles demonstrated that microbial community structures were affected by tillage and/or organic and inorganic inputs via PC1 and by land use and/or soil depth via PC2. All the field treatments were separated by PM into two groups via PC1, the tilled and the no-tilled soils, with the tilled soils more developed towards MO. The tilled soils were separated with respect to MO via PC1 associated with the differences in mineral fertilization and the quality of organic amendments, with the soils without organic amendment being more similar to MO. The separations via PC1 were principally driven by bacteria and associated with soil pH and soil C, N and P. The separations via PC2 were driven by fungi, actinomycetes and Gram (−) bacteria, and associated with soil bulk density. The separations via both PC1 and PC2 were associated with soil aggregate stability and exchangeable K, indicating the effects of weathering and soil aggregation. The results suggest that in spite of the importance of mineral fertilization and organic amendments, tillage and land-use type play a significant role in determining the nature of the development of associated soil microbial community structures at the initial stages of soil formation.     

Organic farming fosters agroecosystem functioning in Argentinian temperate soils: Evidence from litter decomposition and soil fauna

Benefits of organic farming on soil fauna have been widely observed and this has led to consider organic farming as a potential approach to reduce the environmental impact of conventional agriculture. However, there is still little evidence from field conditions about direct benefits of organic agriculture on soil ecosystem functioning. Hence, the aims of this study were to compare the effect of organic farming versus conventional farming on litter decomposition and to study how this process is affected by soil meso- and macrofauna abundances. Systems studied were: (1) organic farming with conventional tillage (ORG), (2) conventional farming with conventional tillage (CT), (3) conventional farming under no-tillage (NT), and (4) natural grassland as control system (GR). Decomposition was determined under field conditions by measuring weight loss in litterbags. Soil meso- and macrofauna contribution on decomposition was evaluated both by different mesh sizes and by assessing their abundances in the soil. Litter decomposition was always significantly higher after 9 and 12 months in ORG than in CT and NT (from 2 to 5 times in average), regardless decomposer community composition and litter type. Besides, mesofauna, macrofauna and earthworm abundances were significantly higher in ORG than in NT and CT (from 1.6 to 3.8, 1.7 to 2.3 and 16 to 25 times in average, respectively for each group). These results are especially relevant firstly because the positive effect of ORG in a key soil process has been proved under field conditions, being the first direct evidence that organic farming enhances the decomposition process. And secondly because the extensive organic system analyzed here did not include several practices which have been recognized as particularly positive for soil biota (e.g. manure use, low tillage intensity and high crop diversity). So, this research suggests that even when those practices are not applied, the non-use of agrochemicals is enough to produce positive changes in soil fauna and so in decomposition dynamics. Therefore, the adoption of organic system in an extensive way can also be suggested to farmers in order to improve ecosystem functioning and consequently to achieve better soil conditions for crop production.     

Artificial neural network modeling of microbial community structures in the Atlantic Forest of Brazil

Microbial communities vary across the landscape in forest soils, but prediction of their biomass and composition is a difficult challenge due to the large numbers of variables that influence their community structures. Here we examine the use of artificial neural network (ANN) models for extraction of patterns among soil chemical variables and microbial community structures in forest soils from three regions of the Atlantic Forest of Brazil. At each location, variations in soil chemical properties and FAME profiles of microbial community structures were mapped at 20 × 20 m intervals within 10 ha parcels. Geostatistical analyses showed that spatial variability in soil physical and chemical variables could be mapped at scale distances of 20 m, but that FAME profiles representing the microbial communities were highly variable and had no spatial dependence at the same scale in most cases. RDA analysis showed that FAME signatures representing different microbial groups were positively associated with soil pH, OM, P and base cations concentrations, whereas microbial biomass was negatively associated with the same environmental factors. In contrast, ANN models revealed clear relationships between microbial community structures at each parcel location, and generated verifiable predictions of variations in FAME profiles in relation to soil pH, texture, and the relative abundances of base cations. The results suggest that ANN modeling provides a useful approach for describing the relationships between microbial community structures and soil properties in tropical forest soils that were not able to be captured using geostatistical and RDA analyses.     

Indicators and trade-offs of ecosystem services in agricultural soils along a landscape heterogeneity gradient

Soil functions can be classified as supporting (nutrient cycling) and provisioning (crop production) ecosystem services (ES). These services consist of multiple and dynamic functions and are typically assessed using indicators, e.g. microbial biomass as an indicator of supporting services. Agricultural intensification negatively affects indicators of soil functions and is therefore considered to deplete soil ES. It has been suggested that incorporating leys into crop rotations can enhance soil ES. We examined this by comparing indicators of supporting soil services – organic carbon, nitrogen, water holding capacity and available phosphorous (carbon storage and nutrient retention); net nitrogen mineralisation rate and microbial biomass (nutrient cycling and retention) – in barley fields, leys and permanent pastures along a landscape heterogeneity gradient (100, 500 and 1000 m radii). In addition, barley yields (provisioning service) were analysed against these indicators to identify trade-offs among soil services. Levels of most indicators did not differ between barley and ley fields and were consistently lower than in permanent pastures. Leys supported greater microbial biomass than barley fields. Landscape heterogeneity had no effect on the indicators or microbial community composition. However, landscape heterogeneity correlated negatively with yield and soil pH, suggesting that soils in heterogeneous landscapes are less fertile and therefore have lower yields. No trade-offs were found between increasing barley yield and the soil indicators. The results suggest that soil ES are determined at the field level, with little influence from the surrounding landscape, and that greater crop yields do not necessarily come at the expense of supporting soil services.     

The positive relationship between soil quality and crop production: A case study on the effect of farm compost application

In order to ensure sustainable agriculture, and for evaluating the effects of management practices on soil processes, tools for assessing soil quality are required. The development and use of a multiparameter index, which includes a wide range of soil properties, have been tested and found useful by several studies. However, soil quality measurements are ‘stand-alone’ tools unless they are either linked to important soil functions, used to characterize (agro)ecosystems or used to predict sustainability or productivity. In our study, the relationship between crop production and soil quality was assessed in a six year old field experiment studying the effect of farm compost (FC) amendment in a crop rotation of potato, fodder beet, forage maize and Brussels sprouts. To justify the hypothesis that repeated FC amendment results in both improved soil quality and consequently higher crop yields, a wide range of chemical, biological and physical soil properties were measured and integrated into a soil quality index (SQI). Next, crop yields were used as a functional goal to verify the causal relationship between SQI and crop production. Our results showed that there were significant changes in chemical, physical and biological soil quality as a result of repeated FC amendment. This was evidenced for example by a remarkable increase in both soil organic carbon (SOC) and total N content. Microbial biomass, the relative amount of bacterivorous nematodes and earthworm number were significantly increased as well and, together with SOC and total N, indicated as the dominant factors in assessing soil quality. The integration of these key indicators into the SQI revealed higher SQI values when FC was applied. In addition, crop yields were increased in all FC treated plots by which SOC was pointed out as the most important indicator influencing crop production. Finally, a causal relationship was observed between soil quality and the yield of potato and fodder beet. We conclude that our SQI may be a promising and useful tool to compare different (soil) management practices in relation to a strategic, regional goal, e.g., sustainable high yields. Before generalizing, we recommend a thorough validation of our SQI in other long-term field experiments.     

Effects of burning on soil macrofauna in a savanna-woodland under different experimental fuel load treatments

In West African savanna-woodland, the use of prescribed burning as a management tool has ecological implications for the soil biota. Yet, the effects of fire on soil inhabiting organisms are poorly understood. The aim of this study was to examine the responses of soil macro-invertebrates to early fires in a Sudanian savanna-woodland on a set of experimental plots subject to different fuel load treatments. The abundance of major macro-invertebrate taxa and functional groups, and taxon richness were quantified in soil cores collected from three different soil layers before and immediately after burning. The results indicated that, overall, there was substantial spatial and temporal variation in the composition of macro-invertebrate assemblages. The immediate effects of fire were to reduce total invertebrate numbers and numbers of many invertebrate groups dramatically. This is probably due to the fact that many of the surface-dwelling macrofauna perished as a result of less favorable microclimate due to fire, diminished resources, or migrate to safer environments. Fuel load treatment did not affect the community taxonomic richness or abundance of the soil-dwelling fauna. Furthermore, annual changes in community composition were more pronounced at the burnt site than in the control. This could be related to the inter-annual difference in precipitation pattern recorded during the two-year study period at our site. Since soil macrofauna population declines in fire-disturbed areas, increasing fire prevalence may jeopardize the long-term conservation of fire sensitive macrofauna groups. Special fire management attention is therefore recommended with due consideration to the type of burning and fuel properties to avoid the detrimental effects of intense fire affecting the resilience of savanna soil macrofauna species.     

An assessment of subsoil organic carbon stocks in England and Wales

It is estimated that half the soil carbon globally is in the subsoil, but data are scarce. We updated estimates of subsoil organic carbon (OC) in England and Wales made by Bradley et al. (2005) using soil and land‐use databases and compared the results with other published data. We estimated that the soils of England and Wales contained 1633, 1143 and 506 Tg of OC at 0–30, 30–100 and 100–150 cm depths, respectively. Thus, half of the soil OC was found below 30 cm depth. Peat soils accounted for the largest proportion, containing 44% of all the OC below 30 cm despite their small areal extent, followed by brown soils, surface‐water gley soils, ground‐water gley soils and podzolic soils. Peat soils had more than 25% of their profile OC per unit area in the 100–150 cm depth, whereas most other soils had <8% at this depth. The differences between soil types were consistent with differences in soil formation processes. Differences in depth distributions between land uses were small, but subsoil OC stocks in cultivated soils were generally smaller than in soils under grassland or other land uses. Data on subsoil OC stocks in the literature were scarce, but what there was broadly agreed with the findings of the above database exercise. There was little evidence by which to assess how subsoil OC stocks were changing over time.     

Characterization and Film-Forming Properties of Gelatins from Whitemouth Croaker (Micropogonias furnieri) Skin and Bones

The Whitemouth croaker (Micropogonias furnieri), due to its abundance, is considered one of the most traditional and important species fished in the coastal waters and estuaries of South America. The aim of this work was to produce biopolymeric films of gelatins obtained from skin and bones of Whitemouth croaker. The fish gelatins were characterized through the yield, chemical composition, physiochemical, and rheological properties. The films were characterized by tensile strength (TS), elongation at break (EAB), water vapor permeability (WVP), thermogravimetric analysis (TGA), Fourier transform infrared spectroscopy (FT-IR), and optical properties. The values of protein yield, hydroxyproline content, gel strength, melting temperature, gelling temperature, and viscosity of the skin gelatin were higher than the values of the bone gelatin. The films obtained of skin gelatin showed all properties and thermal analysis superior in relation to the films of bone gelatin; this can be justified by the best physicochemical and rheological characteristics of the skin gelatin.     

Investigation of the high-amylose maize starch gelatinization behaviours in glycerol-water systems

The effect of glycerol on gelatinization behaviours of high-amylose maize starch was evaluated by confocal laser scanning microscopy (CLSM), scanning electronic microscope (SEM), differential scanning calorimetry (DSC), texture analyzer (TPA) and rheometer. Gelatinization of the high-amylose maize starches with glycerol content of 10% (w/w) began at 95.4 °C (T_o), peaked at 110.3 °C (T_p), and completed at 118.9 °C (T_c). The birefringence began to disappear at around 100 °C and finished at 120 °C which corresponded well to the onset and conclusion temperatures obtained by DSC. The high-amylose maize starch granules maintained original morphological structure at 100 °C and swelled to a great degree at 110 °C. The high-amylose maize starch paste formed at 100 °C showed the lowest hardness (39.92 g), while at 120 and 130 °C, showed the highest hardness (610.89 g and 635.43 g, respectively). It should be noted that in going from 100 °C to 110 °C there is a significant increase in the viscosity of the slurry solution. The identical apparent viscosity was observed when the shear rate exceed 100 s⁻¹, resulting from the high-amylose maize starch granules were completely gelatinized at 120 °C, which was consistent with DSC analysis.     

Wheat flour enriched with oat β-glucan: A study of hydration,rheological and fermentation properties of dough

The objective of this study was to evaluate the effects of the incorporation of oat β-glucan (OβG) on the hydration, rheological and fermentation properties of wheat flour dough. Wheat flour was substituted with OβG at levels varying from 1 g/100 g–5 g/100 g. The addition of OβG significantly increased water absorption and dough development time. The dilution effect of OβG, competing for water and interaction between OβG and gluten proteins, deteriorated the gluten network structure and reduced the stability of dough. Rheological evaluation revealed an increasing tendency to solid-like behavior with increasing addition of OβG. Regarding dough fermentation properties, OβG had no effect on yeast activity but reduced the gas retention capacity of dough. Our findings indicate that OβG is a key component that determines the properties of dough, and excess OβG exhibited poorer processing characteristics compared with control.